A winning tradition was established on the baseball diamond at Malone by late NAIA Hall of Fame Coach Bob Starcher. Coach Starcher led the Pioneer baseball program for 23 seasons and accumulating 521 wins while at Malone. During Starcher's tenure as head coach, the program experienced 19 winning seasons and 12 conference or district titles. In 2007, the last baseball game was played on the site of long-time Bob Starcher Field at Malone College.
Football
Malone University played football continuously between 1993 and 2018. The program began under head coach Joe Palmisano with a 23–23 tie against Bethany on September 4, 1993. Malone concluded their program with an all-time record of 104 wins, 164 losses, and 2 ties. The last head football coach was Fred Thomas, who coached from 2016-2018. He took over the program from Eric Hehman, who held the position from 2009 until 2015. The school disbanded the team in February 2019.
Annual results
Track and field/cross country
There have been a total of 133 Men's NAIA track and fieldAll-Americans and 17 NAIA national champions. On the woman's side, there have been 59 NAIA All-Americans and two national champions. Both of these totals include indoor and outdoor track and field. Keith Spiva is arguably the most accomplished track and field athlete produced by Malone. He won 4 NAIA national titles and was named an All-American 6 times. He is also the only Malone track and field athlete to win back-to-back national titles in a single event. Christopher Sinick is the most decorated male athlete, with a total of 11 All-American awards in both cross country and track. Combination of track and field with cross-country accomplishments, there have been 69 additional Men's NAIA All-Americans and 28 Woman's NAIA All-Americans. Moreover, Malone has produced one Men's and one Woman's individual cross country national champions. Malone has won the following national honors:
NAIA
*Men's national cross-country champions: 1972,2007,2008 and 2009
*Men's national cross-country runner-up: 1973, 1980, 1989, and 2001
*Women's national cross-country champions: 1999
*Women's national cross-country runner-up: 1998
NCCAA
*Men's national track & field champions: 1973, 1989, 1991, and 2007
*Men's national cross-country champions : 1986–1992, 1994, 1995, 1997–2000, 2002, 2003, 2005, and 2006
*Women's national track & field champions: 1987–1989, 1999–2002, 2004, and 2005
*Women's national cross-country champions : 1986, 1987, 1989, 1990, 1992, 1993, 1997–1999, and 2004
Volleyball
Women's Volleyball has been played at Malone since 1975 and has amassed nearly 900 all-time wins. The current coach Tanya Hockman has been head of the program since 1999 and has held the position longer than any other volleyball coach at Malone.