were preceded by the shorter Type VIIB submarines. U-559 had a displacement of when at the surface and while submerged. She had a total length of, a pressure hull length of, a beam of, a height of, and a draught of. The submarine was powered by two Germaniawerft F46 four-stroke, six-cylinder supercharged diesel engines producing a total of for use while surfaced, two Brown, Boveri & Cie GG UB 720/8 double-acting electric motors producing a total of for use while submerged. She had two shafts and two propellers. The boat was capable of operating at depths of up to. The submarine had a maximum surface speed of and a maximum submerged speed of. When submerged, the boat could operate for at ; when surfaced, she could travel at. U-559 was fitted with five torpedo tubes, fourteen torpedoes, one SK C/35 naval gun, 220 rounds, and a C/30 anti-aircraft gun. The boat had a complement of between forty-four and sixty.
Her first patrol took her from Kiel on 4 June 1941, across the North Sea and through the gap between Greenland and Iceland. She arrived at St. Nazaire in occupied France on 5 July. Her second sortie met with success when she torpedoed and sank the Alva about west of Ushant. She returned to her French base on 22 August 1941.
3rd patrol
For her third patrol, beginning on 20 September, she was assigned to the 'Goeben' group, which were the first U-boats to enter the Mediterranean in World War II through the heavily defended Strait of Gibraltar. She reached Salamis in Greece, after having first investigated the Libyan/Egyptian border.
4th patrol
On her fourth patrol, she torpedoed and sank the Australian sloop off the Libyan coast; although most survivors were picked up by other ships, three men managed to reach dry land where they were rescued by advancing British troops.
5th, 6th and 7th patrols
On her fifth patrol, which began on 8 December 1941, the boat sank on the 23rd. Shuntien carried 850 – 1,100 German and Italian prisoners of war. Between 800 and 1,000 people were killed, including at least 700 PoWs. Her sixth and seventh patrols were both from Salamis to the area of the Libyan coast. They were without success.
8th and 9th patrols
Having moved to Pula in Croatia in March 1942, she then sortied on 18 May, and damaged the oiler Brambleleaf on 10 June. Her ninth patrol, however, was without success.
It was her own demise that made her most famous. At about 05:00 on 30 October 1942, U-559 was spotted by a Royal Air ForceSunderland, W from 201 Squadron in position, 70 miles north of the Nile Delta. The destroyer was alerted by radio and steamed to intercept her, while the destroyers,, and sailed from Port Said, Egypt. At about 12:34 a Wellesleypatrol aircraft, F from 47 Squadron, spotted the periscope of the submerged U-559 and attacked with depth charges. The destroyer group hunted for the U-boat for 16 hours, constantly depth charging. After dark, U-559, with a cracked pressure hull, unable to maintain level trim and four of her crew dead from explosions and flooding, was forced to the surface. She was close to Petard, which immediately opened fire with her Oerlikon 20 mm cannon. The German crew hurriedly scrambled overboard without destroying their codebooks or Enigma machine and, crucially, having failed to open all the sea-water vents to scuttle the U-boat properly. Three Royal Navy sailors, Lieutenant Anthony Fasson, Able Seaman Colin Grazier and NAAFI canteen assistant Tommy Brown, then boarded the abandoned submarine. There are differing reports as to how the three British men boarded the U-boat. Some accounts say that they "swam naked" to U-559, which was sinking, but slowly. Sebag-Montefiore states that they either leapt from Petard or, in Brown's case, from a whaler. They retrieved the U-boat's Enigma key setting sheets with all current settings for the U-boat Enigma network. Two German crew members, rescued from the sea, watched this material being loaded into Petard's whaler but were dissuaded from interfering by an armed guard. Grazier and Fasson were inside the U-boat, attempting to get out, when it foundered; both drowned.
Aftermath
Grazier and Fasson were awarded the George Cross posthumously, Brown was awarded the George Medal. The Victoria Cross was considered but not awarded, for the ostensible reason that their bravery was not "in the face of the enemy". Another consideration may have been that a Victoria Cross would have drawn unwanted attention to the U-boat capture from German Intelligence. It was also discovered that Brown had lied about his age in order to enlist, and was only 16 years old, making him one of the youngest recipients of the George Medal. He was discharged and returned home to North Shields, only to die two years later attempting to rescue his younger sister from a house fire. The code-book material they retrieved was immensely valuable to the code-breakers at Bletchley Park, who had been unable to read the 4-rotor U-boat Enigma for ten months since its introduction by the German Kriegsmarine at the beginning of 1942. This captured material allowed them to read the cyphers for several weeks, and to break U-boat Enigma thereafter right through to the end of the war. The recovery was one of several such events, that inspired the fictional account of the submarine capture in the 2000 film U-571.