In 1876 Soden bought into the Boston Base Ball Club. He and J.B. Billings later purchased controlling interest in the club and Soden became the team's president in 1877. Soden is credited with inventing the baseball reserve clause - in 1880, standard player contracts began including a clause stating that the club could reserve the player for the following season; teams could reserve up to 5 players. In 1883, the number was increased to 11, which was a typical roster size in that era, and soon teams were allowed unlimited reserves. In 1882, Soden served briefly as president of the National League following the death of William Hulbert. When the rival American Association was preparing to expand to 8 teams for the 1883 season, Soden acted to add NL teams in New York City and Philadelphia, replacing the Troy Trojans and Worcester Ruby Legs, the bottom two teams in the league. Although Troy and Worcester objected to their removal, their attendance problems - drawing only 6 and 18 spectators in their final two games against one another - sealed their fate. Soden played a major role in the war between the NL and the Players' League in 1890, bankrolling several teams in the league as attendance dropped; by the time the NL emerged triumphant, Soden owned a majority of the New York Giants in addition to his control of the Boston franchise. Boston won 5 pennants between 1891 and 1898. After losing the pennant to Baltimore in 1894 and 1895, a struggling start in 1896 led Soden to observe that his players' on-field arguments were having a negative effect, and stated that any players fined for abusing umpires would now pay their own fines rather than have the team cover the cost secretly; Boston went on a 22-2 run over the next few weeks, and briefly took over first place, but finished behind Baltimore that season. Soden was known for being stingy, and catcher Boileryard Clarke observed after coming to the Beaneaters from Baltimore in 1899 that the team owner was also amazingly distant. Clarke later insisted that although he played for Boston for two years, Soden never knew he was on the team. After the American League emerged as a rival in the 20th century, many players began deserting the NL for the new league, and Boston suffered the heaviest casualties.